MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Granulicatella sp.
19428wC4_WM01
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 219
bases: 2,027,228 bps
CDS: 1,683
rRNA: 6
Repeat region:
tmRNA: 1
tRNA: 46
misc RNA:
Total features: 1,736
Total number of protein coding genes annotated/found:
1,683
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5034|JADGLB010000010.1
SEQF5034_00039
Genome Viewer
NA
AA
531/177
4402-3872
ATP-dependent protease subunit HslV
SEQF5034|JADGLB010000010.1
SEQF5034_00040
Genome Viewer
NA
AA
891/297
5417-4527
Tyrosine recombinase XerC
SEQF5034|JADGLB010000010.1
SEQF5034_00041
Genome Viewer
NA
AA
1014/338
6885-5872
(R)-2-hydroxyglutarate dehydrogenase
SEQF5034|JADGLB010000010.1
SEQF5034_00042
Genome Viewer
NA
AA
1074/358
8088-7015
hypothetical protein
SEQF5034|JADGLB010000010.1
SEQF5034_00043
Genome Viewer
NA
AA
1020/340
9454-8435
Lipoate-protein ligase LplJ
SEQF5034|JADGLB010000010.1
SEQF5034_00044
Genome Viewer
NA
AA
741/247
10231-9491
putative protein
SEQF5034|JADGLB010000010.1
SEQF5034_00045
Genome Viewer
NA
AA
795/265
11034-10240
hypothetical protein
SEQF5034|JADGLB010000010.1
SEQF5034_00046
Genome Viewer
NA
AA
381/127
11985-11605
Lactoylglutathione lyase
SEQF5034|JADGLB010000010.1
SEQF5034_00047
Genome Viewer
NA
AA
672/224
12676-12005
Adapter protein MecA
SEQF5034|JADGLB010000010.1
SEQF5034_00048
Genome Viewer
NA
AA
282/94
13045-12764
putative protein YjdJ
SEQF5034|JADGLB010000010.1
SEQF5034_00049
Genome Viewer
NA
AA
219/73
13283-13065
hypothetical protein
SEQF5034|JADGLB010000010.1
SEQF5034_00050
Genome Viewer
NA
AA
819/273
14052-13234
hypothetical protein
SEQF5034|JADGLB010000010.1
SEQF5034_00051
Genome Viewer
NA
AA
477/159
14509-14033
hypothetical protein
SEQF5034|JADGLB010000010.1
SEQF5034_00052
Genome Viewer
NA
AA
1338/446
15843-14506
ComF operon protein 1
SEQF5034|JADGLB010000010.1
SEQF5034_00053
Genome Viewer
NA
AA
492/164
16423-15932
Toxin PezT
SEQF5034|JADGLB010000010.1
SEQF5034_00054
Genome Viewer
NA
AA
477/159
17157-16681
Antitoxin PezA
SEQF5034|JADGLB010000010.1
SEQF5034_00057
Genome Viewer
NA
AA
1323/441
19433-18111
hypothetical protein
SEQF5034|JADGLB010000010.1
SEQF5034_00058
Genome Viewer
NA
AA
876/292
20322-19447
33 kDa chaperonin
SEQF5034|JADGLB010000010.1
SEQF5034_00059
Genome Viewer
NA
AA
126/42
20463-20338
hypothetical protein
SEQF5034|JADGLB010000010.1
SEQF5034_00060
Genome Viewer
NA
AA
1899/633
23032-21134
ATP-dependent zinc metalloprotease FtsH
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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